BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB019G03SP1|AL427520
(914 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig307 657 0.0
>3x_Contig307
Length = 1772
Score = 657 bits (328), Expect = 0.0
Identities = 351/361 (97%), Gaps = 2/361 (0%)
Strand = Plus / Plus
Query: 1 gatcagatantcttcaataatgatatgttttctgatgatagggcaacagaatctcagttt 60
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1305 gatcagatagtcttcaataatgatatgttttctgatgatagggcaacagaatctcagttt 1364
Query: 61 aaagggatcaaggattgctccgttggcaccatcagcgataccatgaaccagctttttggg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1365 aaagggatcaaggattgctccgttggcaccatcagcgataccatgaaccagctttttggg 1424
Query: 121 aatttttcaaagcttcacggaaacgaaataatagaggaagtcttctatttgcctgamcca 180
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 1425 aatttttcaaagcttcacggaaacgaaataatagaggaagtcttctatttgcctgaacca 1484
Query: 181 tcagtgtttgtgaagaaatctgaagatacaattaamataaaaagctcatcgtgttatttc 240
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 1485 tcagtgtttgtgaagaaatctgaagatacaattaaaataaaaagctcatcgtgttatttc 1544
Query: 241 acggaatatttaamtctgamacccaaccgtggggtaaaamatttcagggccctagtgcta 300
||||||||||||| ||||| ||||||||||||||||||| ||||||||||||||||||||
Sbjct: 1545 acggaatatttaaatctgaaacccaaccgtggggtaaaaaatttcagggccctagtgcta 1604
Query: 301 accactgaggcaaaamatgattgcmtgtcttt-cgtatcacaaatgtc-tcagacatatt 358
||||||||||||||| |||||||| ||||||| ||||||||||||||| |||||||||||
Sbjct: 1605 accactgaggcaaaaaatgattgcatgtctttccgtatcacaaatgtcatcagacatatt 1664
Query: 359 c 359
|
Sbjct: 1665 c 1665
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.39 0.713 1.32
Gapped
Lambda K H
1.39 0.713 1.32
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5420
Number of Sequences: 1807
Number of extensions: 5420
Number of successful extensions: 28
Number of sequences better than 1.0e-20: 1
length of query: 914
length of database: 10,358,551
effective HSP length: 16
effective length of query: 898
effective length of database: 10,329,639
effective search space: 9276015822
effective search space used: 9276015822
T: 0
A: 40
X1: 5 (10.0 bits)
X2: 14 (28.1 bits)
S1: 12 (24.5 bits)
S2: 50 (100.7 bits)